Protean Publications

 

2024 Publications

 
Featured
Synthetic lethality of ERBB2 and CCND1 in breast cancer at scale

Authors: Rishi Nair, Evan P White, Roy Khalife, Anthony M Magliocco
Journal: Molecular Cancer Therapeutics | Volume 23, Issue 6_Supplement
Publisher: The American Association for Cancer Research

Incidence of Breast Cancer in Hispanic Women Across the US: A Focus on Texas

Authors: Catalina Esguerra, Kemely Santos Barbosa, Roy Khalife, Anthony Magliocco
Journal: Cancer Research (2024) 84 (9_Supplement): PO5-09-09
Publisher: The American Association for Cancer Research

Validation of Aventa FusionPlus: An LDT NGS assay for comprehensive cancer genomic profiling

Authors: Shadi Melnyk, Jon Belton, Sofia Nomikou, Katelyn Powell, Daniel Heiney, Roy Khalife, Damien Jones, Anthony Schmitt, Catherine Wilson, Melissa Won, Anthony Magliocco, Chris Roberts
Journal: Cancer Research (2024) 84 (6_Supplement): 325.
Publisher: The American Association for Cancer Research

Genetic characteristics between males and females with urothelial bladder cancer

Authors: Rishi Nair, Roy Khalife, Anthony Magliocco
Journal: Cancer Research (2024) 84 (6_Supplement): 883.
Publisher: The American Association for Cancer Research

What can we learn from a retrospective evaluation of HER2, P53 and P16INK4A protein expression in rare ovarian tumors?

Authors: Kavitha M. Advikolanu-Rao; Anthony M. Magliocco; Andrew W. Maksymiuk
Journal: Cancer Research (2024) 84 (5_Supplement_2): A063.
Publisher: The American Association for Cancer Research

Comparing Classifications from Multiple Variant Annotation Software Solutions Using Real-World Next Generation Sequencing Data from Oncology Testing

Authors: Roy Khalife, Tara M. Love, Lara Sucheston-Campbell, Michael J. Clark, Helle Sorensen, Shuba Krishna, Anthony Magliocco
Journal: Journal of Molecular Pathology | 2024, 5(1), 81-95
Publisher: MDPI

 

2023 Publications

 
Featured
Comparative Analysis of Next-Generation Sequencing and Rapid Molecular Analysis: Evaluating Efficiency, Accuracy, and Clinical Applications

Authors: A Magliocco, R Khalife, C Wilson, R Balaraman
Journal: Journal of Molecular Diagnostics | Volume 25, Issue 11
Publisher: Elsevier Science Inc

Comparison Study Among Multiple Variant Annotation Software Solutions

Authors: R Khalife, A Magliocco, A Gholami, S Krishna, T Love, H Sorensen, L Sucheston-Campbell
Journal: Journal of Molecular Diagnostics | Volume 25, Issue 11
Publisher: Elsevier Science Inc

Molecular Discrepancies in Gastric Cancer between Asians and White Populations

Authors: A Magliocco, S Peles, R Khalife
Journal: Journal of Molecular Diagnostics | Volume 25, Issue 11
Publisher: Elsevier Science Inc

How Cancer Outcomes Are Affected by Alterations in a VGSC Gene

Authors: A Magliocco, C Esguerra, R Khalife, C Houser, H Gould
Journal: Journal of Molecular Diagnostics | Volume 25, Issue 11
Publisher: Elsevier Science Inc

Validation of PRKCB Immunohistochemistry as a Biomarker for the Diagnosis of Ewing Sarcoma

Authors: Victor Zota, Gene P Siegal, David Kelly, Julia A Bridge, Anders Berglund, Katherine Bui, Farah Khalil, Damon R. Reed, Soner Altiok, Anthony Magliocco, Marilyn M Bui
Journal: Fetal and Pediatric Pathology | Volume 42, issue 2
Publisher: Taylor & Francis

DelPHI: A Novel Program to Accelerate Access to Precision Oncology in the Community Oncology Setting

Authors: Anthony Martin Magliocco, Roy Khalife, Catherine Wilson, Tara M Love, Rama Balaraman
Journal: Journal of Clinical Oncology | Volume 41
Publisher: American Society of Clinical Oncology

Human LY6 Gene Family: Potential Tumor-associated Antigens and Biomarkers of Prognosis in Uterine Corpus Endometrial Carcinoma

Authors: Luke A Rathbun, Anthony M Magliocco, Anil K Bamezai
Journal: Oncotarget | Volume 14
Publisher: Impact Journals, LLC

An miRNA Signature Predicts Grading of Pancreatic Neuroendocrine Neoplasms

Authors: James Saller, Daley White, Brooke Hough, Sean Yoder, Junmin Whiting, Dung-Tsa Chen, Anthony Magliocco, Domenico Coppola
Journal: Cancer Genomics & Proteomics | Volume 20, Issue 2
Publisher: International Institute of Anticancer Research

Distinct Molecular Differences Between African American/Black and White Women with Triple Negative Breast Cancer

Authors: So Hyeon Park, Roy Khalife, Evan White, Anthony Magliocco
Journal: Cancer Research | Volume 83, Issue 5
Publisher: The American Association for Cancer Research

P080: BRCA1 Germline Variant Driving a Case of Colon Cancer

Authors: F Sautto, R Khalife, C Colton, D Coppola, A Magliocco
Journal: Genetics in Medicine Open, 2023
Publisher: Elsevier Science Inc

 

2022 Publications

 
Featured
Analysis of MRE11 and Mortality Among Adults With Muscle-Invasive Bladder Cancer Managed With Trimodality Therapy

Authors: Anthony M Magliocco, Jennifer Moughan, David T Miyamoto, Jeff Simko, William U Shipley, Phillip J Gray, Michael P Hagan, Matthew Parliament, William J Tester, Anthony L Zietman, Susan McCarthy, Daryoush Saeed-Vafa, Yin Xiong, Taylor Ayral, Alan C Hartford, Ashish Patel, Seth A Rosenthal, Susan Chafe, Richard Greenberg, Michael A Schwartz, Mark E Augspurger, John A Keech, Kathryn A Winter, Felix Y Feng, Jason A Efstathiou
Journal: JAMA Network Open | Volume 5, Issue 11
Publisher: American Medical Association

Analytical Validation of Thyroid GuidePx: An RNA-Seq-Based Gene Expression Classifier for Papillary Thyroid Cancer

Authors: A Hernandez, C Stretch, C Wilson, D Heiney, K Powell, E White, G Tripathi, F Khan, M Khalil, O Bathe, A Magliocco
Journal: Journal of Molecular Diagnostics | Volume 24, Issue 10
Publisher: Elsevier Science Inc

Value of NGS Analysis for Benign Liver Disease Diagnosis

Authors: R Khalife, S Park, A Magliocco
Journal: Journal of Molecular Diagnostics | Volume 24, Issue 10
Publisher: Elsevier Science Inc

DelPHI: Delivering Precision Health Insights for Timely Diagnosis and Treatment of Epithelioid Sarcoma Using Protean MAPS and NAVIFY Digital Tools

Authors: A Magliocco, S Park, R Khalife, T Love, A Gholami, A Markus, H Sorensen
Journal: Journal of Molecular Diagnostics | Volume 24, Issue 10
Publisher: Elsevier Science Inc

DelPHI: Delivering Precision Health Insights for Timely Treatment of Rhabdomyosarcoma Using Protean MAPS and NAVIFY Digital Tools

Authors: S Park, R Khalife, T Love, A Gholami, A Markus, H Sorensen, A Magliocco
Journal: Journal of Molecular Diagnostics | Volume 24, Issue 10
Publisher: Elsevier Science Inc

Evaluation of Erb-B2 Expression from Archival Tumor Tissue in Early Stage Epithelial Ovarian Carcinoma Patient Prognosis

Authors: Kavitha Advikolanu Rao, Anthony Magliocco, Andrew Maksymiuk
Journal: Cancer Research | Volume 82, Issue 12
Publisher: The American Association for Cancer Research

Colorectal Cancer and its Molecular Differences Between Sexes

Authors: Roy Khalife, Genevra Magliocco, So Hyeon Park, Anthony Magliocco
Journal: Cancer Research | Volume 82

Imaging Based EGFR Mutation Subtype Classification Using EfficientNet

Authors: Daniel L Franklin, Tara Pattilachan, Anthony Magliocco
Journal: Cancer Research | Volume 82

Impact of Molecular Features on Outcome in African American or Black Women With Type 1 Endometrial Cancer

Authors: Roy Khalife, So Hyeon Park, Stephanie Erickson, Genevra Magliocco, Anthony Magliocco
Journal: Journal of Clinical Oncology | Volume 40

Case of an Embryonal Rhabdomyosarcoma in a Pediatric Patient: Therapeutic Target Identification

Authors: Roy Khalife, So Hyeon Park, Anthony Magliocco
Journal: Pediatric Blood & Cancer | ASPHO 2022

Key Genetic Characteristics of Pediatric AML Between Black/African Americans and Caucasians

Authors: Roy Khalife, So Hyeon Park, Anthony Magliocco
Journal: Pediatric Blood & Cancer | ASPHO 2022

Using Optical Genome Mapping and NGS to Understand Epitheliod Sarcoma in a Pediatric Patient

Authors: So Hyeon Park, Roy Khalife, Anthony Magliocco
Journal: Pediatric Blood & Cancer | ASPHO 2022

Upregulated Ly-6 Gene Expression is Associated With Poor Overall Survival in Uterine Corpus Endometrial Carcinoma Patients

Authors: Luke Rathbun, Anthony Magliocco, Anil K Bamezai
Journal: The Journal of Immunology | Volume 208

End-to-End Risk Stratification Model to Predict Progression from Barrett’s Esophagus to Esophageal Adenocarcinoma

Authors: Daniel Franklin, Tara Pattilachan, F Scott Corbett, Anthony Magliocco, Domenico Coppola
Journal: Laboratory Investigation | Volume 102

Evaluation of the Activity of Key Actionable Oncogenic Driving Pathways in Triple Negative Breast Cancer Using OncoSignal™; a Novel Molecular Assay Based on Transcriptional Profile Analysis

Authors: Genevra Magliocco, Eveline den Biezen, Diederick Keizer, Martijn Akse, Martijn van Zelst, Dianne van Strijp, Saskia Vermeer, Anja van de Stolpe, Anthony Magliocco
Journal: Cancer Research | Volume 82

Distinct and Targetable Molecular Features of Breast Cancer in African American Women

Authors: Genevra Magliocco, Roy Khalife, Anthony Magliocco
Journal: Cancer Research | Volume 82

African American Women With Breast Cancer Have Unique Molecular Features and Reduced Clinical Trial Enrollment

Authors: Genevra Magliocco, Roy Khalife, Anthony Magliocco
Journal: Cancer Epidemiology, Biomarkers & Prevention

2021 Publications

Featured
Improving the Quality of Care for Patients With Advanced Epithelial Ovarian Cancer: Program Components, Implementation Barriers, and Recommendations

Authors: Sarah M Temkin, Matthew P Smeltzer, Monique D Dawkins, Leigh M Boehmer, Leigha Senter, Destin R Black, Stephanie V Blank, Anna Yemelyanova, Anthony M Magliocco, Mollie A Finkel, Tracy E Moore, Premal H Thaker
Source: Cancer | Volume 128, Issue 4

Detection of Cancer Metastasis: Past, Present and Future

Authors: Catherine Alix-Panabieres, Anthony Magliocco, Luis Enrique Cortes-Hernandez, Zahra Eslami-S, Daniel Franklin, Jane L Messina
Journal: Clinical & Experimental Metastasis, 39